There is a glitch at FTDNA, I think. I have put in a request to fix my autosomal file, but I see there are obviously others affected as well. In short, the final SNP sort in order of chromosome number and position number appears to have failed at FTDNA, so the raw data files supposedly ready for downloading are probably an internal intermediarylist of SNPs and chromosomes. The sort order does not appear to be the same as an MS spreadsheet sort order either. The header is different as well, looks like an internal header set of three lines and it also identifies the kit number, which may be a privacy problem. If you unzip the raw data file, then open it in something like Notepad++ you can check to see if is OK.